PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU09193.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NF-YA
Protein Properties Length: 184aa    MW: 20892.3 Da    PI: 9.3592
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU09193.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA101.96e-3248102358
   CBFB_NFYA   3 plYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 p+YVNaKQy++IlkRRq Rakle+++kl  k rkpylh+SRh+hA+ R+RgsgGrF
  PHU09193.1  48 PIYVNAKQYNAILKRRQVRAKLEAQNKL-VKDRKPYLHDSRHRHAMERARGSGGRF 102
                 9***************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
ACVSYPWADS YFGRLISTYE SNAINYPQRA GVTSTRVALP LDCTESLPIY VNAKQYNAIL  60
KRRQVRAKLE AQNKLVKDRK PYLHDSRHRH AMERARGSGG RFLNTENMQQ SNPSSPKHDK  120
NIFKQQAGAM VQHSESGSWG TSTQSGSDVT SIFNDDDMFR QPEFRVSGFP FHMQEAEDFM  180
HVGT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14020.13e-40NF-YA family protein