PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU09394.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TALE

Protein Properties

Length: 338aa MW: 38590.7 Da PI: 4.5217

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU09394.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.4	5.6e-09	281	314	22	55
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp+++++ LA+++gL+ +q+ +WF N+R ++ PHU09394.1 281 WPYPTEADKNSLAESTGLDPKQINNWFINQRKRH 314 58*****************************885 PP
2	ELK	31.2	5e-11	234	255	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++LlrK++++L+sLk EFs PHU09394.1 234 ELKDRLLRKFGSHLSSLKLEFS 255 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence
MDDEMYGFRS TSDYADKALM SPENLMMADE YNNFHNYHNT AMNTPMFGSD DVQLSSDAAN 60 SFSLTTPQNN NIYQIRYGNC GSGSGSRKDD NNNNNEDYDE DGSNIIKAKI VSHPYYPKLL 120 DAYIDCQKVG APPEIANLLE EIRQQNDLRK PNATSICIGA DPELDEFMET YCDILLKYKS 180 DLSRPFDEAT TFLNKIELQL GNLCKDDGGV SSDEEFSCGE AEGQDASMRC EDNELKDRLL 240 RKFGSHLSSL KLEFSKKKKK GKLPKEARQM LLAWWNDHYR WPYPTEADKN SLAESTGLDP 300 KQINNWFINQ RKRHWKPSEN MQLAVMDNLS GQFFSSDD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	1e-112	TALE family protein