PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU09528.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 269aa    MW: 31063.7 Da    PI: 5.3368
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU09528.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.73.9e-2075125155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 ++++GVr+++ +g+W+AeIrdp +   ++r++lg+f taeeAa  +++a+ k++g
  PHU09528.1  75 KKFRGVRQRP-WGKWAAEIRDPMK---KTRIWLGTFETAEEAAMVYDQAAIKIRG 125
                 59********.**********843...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MCLWSPIFVL LIDEALSYKS CKINSSDEEE ENGVKKYVTE IRFEKRVSSV DLKKSSSSSK  60
KKKKMMDVKK DENVKKFRGV RQRPWGKWAA EIRDPMKKTR IWLGTFETAE EAAMVYDQAA  120
IKIRGPDALT NFIKPPLKKD SMVSSVSGYD STGESENLCS PTSVLRHNIS NNNVGVADAK  180
SVKEQMDERK RLEIVMQNEI MLDDNLPLMD QCFLKDFFDF RSPSPLMDDV LLPVFCDKMN  240
LLPELSYDRK LDEDLESCKW VNDFFENYC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16070KKKKKMMDVKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.16e-35ERF family protein