PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU10074.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 340aa    MW: 38594.9 Da    PI: 4.7656
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU10074.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH46.18.6e-15139190155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +r +h ++Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i+  A++Y+k+L+
  PHU10074.1 139 QRITHIAVERNRRKQMNEYLSVLRTLMPQS---YVQRGDQASIVSAAINYVKELE 190
                 799***************************...9******************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MALETITQQQ QQYLCALLGS TNWSVGSDSG SGSGSGSALD YYNNEGFDEF LTNNQNVSAP  60
QEYDDYSNWN LPPPLLVDSQ NEFHEWDQTF SGLDHNFTIP DQQEQLPALG TPVENCSSTT  120
RPRRRRTRTK KNEEEIENQR ITHIAVERNR RKQMNEYLSV LRTLMPQSYV QRGDQASIVS  180
AAINYVKELE QQLQFLSGQK HLTGQNEEVN GETSPFSEFF SIPQYSTTMT VATTSENGPC  240
MNENYKNQQL PATADIEVTM VENHANLKIR SKRRPRLLPR IISGLESLRL SVLHLNVSKV  300
DQFVLCSLSL KVEEDCQMSS VEEIAAVVNQ ILRRIHEEAN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1121128RPRRRRTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.17e-73bHLH family protein