PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU10375.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family M-type_MADS
Protein Properties Length: 212aa    MW: 23542.3 Da    PI: 10.6469
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU10375.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF63.22.9e-201863449
                -SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  4 enksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                + +sn  vtfskRr g++KKA+EL++LC++e+ +i+fs+  k++ +
  PHU10375.1 18 SKESNLLVTFSKRRSGLFKKASELCTLCGVEIVIIVFSPGHKVFSF 63
                6678999********************************9999877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MAKKTSKGRQ KIQMTKMSKE SNLLVTFSKR RSGLFKKASE LCTLCGVEIV IIVFSPGHKV  60
FSFGHPNVES IINRFLTRNP TSSSSTTCQL VEAHRNANVR ELNAQLTGIL NQLEFEKKRE  120
VEIEKIKKAK IGKNWWEGPV NELGLGELEQ LKLGMEDLKK NVTKQMQKII FEASNTPAFF  180
LGGSSSNRGQ VDAKNIKGLG LSMATNGPTS FP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.12e-54M-type_MADS family protein