PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU10408.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 240aa    MW: 27773.6 Da    PI: 6.3814
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU10408.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.86.2e-16135224198
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 f+k +++s+v+   +l lp +f+++h  k   +  +tl de+g + e k+   k++    l++GW++F+ +++L +gD +vF+l+  ++f  +v ++r
  PHU10408.1 135 FVKPMLQSHVTGGFWLGLPVHFCKTHLPK--HDEYVTLIDENGDESETKYLALKTG----LSGGWRGFAIDHELVDGDALVFQLIAPTRF--KVYIIR 224
                 89************************433..3347***************666666....************************987777..888877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MVESKKKMLT YEESRLKRLE ENKKRMEELN LTKLAQAVRS ATSPKPSPMK KVKPRVRQEV  60
DLSSVRRSNR VADKPAPNYR EEMDMVSTKP SFEFLECYRR RDLLNRVYAA DEDRQYALER  120
AEQLQSEFDA DFPSFVKPML QSHVTGGFWL GLPVHFCKTH LPKHDEYVTL IDENGDESET  180
KYLALKTGLS GGWRGFAIDH ELVDGDALVF QLIAPTRFKV YIIRVNQAED EETEGVDNVI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.16e-83B3 family protein