PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU10545.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 206aa    MW: 24285.5 Da    PI: 8.7545
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU10545.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.72.8e-101051861093
                 HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..E CS
          B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelv 93 
                 + k++ l++p + +++++++   +  +t++d+ gr++e k + + k+gr++lt+GW++ +  n ++  D ++ ++++   +++l+
  PHU10545.1 105 AKKRDHLYIPVDVVRDYNLE--IPSRMTIRDPAGREFEAKRKDW-KDGRIWLTGGWRNLCWWNLVEKDDRCICEFMRGkGKKSLY 186
                 568899***********888..55579999***********655.55799*******************9999988664555554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MSPTDIAMME KALVKIDDPT CSKRRRVYEE EEETEEDEEE EEEDCEEENE RAGTSKKKAS  60
RSKAGCKRAT TRKMRDIPDL YGADIFKNGR ATQPKNPYFV AKIRAKKRDH LYIPVDVVRD  120
YNLEIPSRMT IRDPAGREFE AKRKDWKDGR IWLTGGWRNL CWWNLVEKDD RCICEFMRGK  180
GKKSLYLQVQ VVYEGSVSNR NNKYKK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12327KRRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60140.12e-12B3 family protein