PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU10681.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

DBB

Protein Properties

Length: 211aa MW: 23537.2 Da PI: 6.2178

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU10681.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	25.3	3.2e-08	4	35	5	36
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg 36 C+ ++++e++ +C+ ++ lC+ C + H+ PHU10681.1 4 QCDVCDKEEASVYCTADEATLCQRCDYQVHHA 35 7***************************9743 PP
2	zf-B_box	28.9	2.3e-09	55	92	3	38
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg..Ht 38 + C+ ++e ++ lfC++++ lC++C l +H+ Ht PHU10681.1 55 SPLCDICQERRALLFCKEDRAILCKECDLPIHRAneHT 92 689*****************************768865 PP

Sequence ? help Back to Top
Protein Sequence Length: 211 aa Download sequence
MKIQCDVCDK EEASVYCTAD EATLCQRCDY QVHHANKLAS KHLRFSLVHP SFKDSPLCDI 60 CQERRALLFC KEDRAILCKE CDLPIHRANE HTQKHNRFLL TGVQLSSAVL VNYNNNQTSS 120 SSMSPTGSEA SNAGTNNLKT RSGNSGMKSN SISTTDQSTP DYFQVDCIQE GSVSTGSISE 180 YLIETLPGWH VEDLLQYPCS SQYGKDLTYI H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39070.1	3e-67	DBB family protein