PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU10684.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

SRS

Protein Properties

Length: 223aa MW: 24818.5 Da PI: 8.3979

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU10684.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	189.1	1.6e-58	13	154	3	154
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskkele 101 s +++CqdCGnqakkdC+++RCRtCCksrg++C+thvkstWvp++ rr r++ ++++ +++++ +a ++ kr s+ s++ + ++ e PHU10684.1 13 SSSSRCQDCGNQAKKDCTYMRCRTCCKSRGYHCETHVKSTWVPVSTRRPRHHLHHSTIQQQQQ-LIQAGPNPKRYR-----SNESHQVIGGGD----QE 101 56789******************************************97777766555443.433333333332.....233333344443....35 PP DUF702 102 tsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 + ++P evss+avfrc+rvss+d++ +++aYqt+v+i+Gh+fkGiLydqG+++ PHU10684.1 102 AGDFPVEVSSAAVFRCIRVSSIDNAVDQYAYQTSVKIAGHIFKGILYDQGPDD 154 788**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence
MMRRSEEEGI SSSSSSRCQD CGNQAKKDCT YMRCRTCCKS RGYHCETHVK STWVPVSTRR 60 PRHHLHHSTI QQQQQLIQAG PNPKRYRSNE SHQVIGGGDQ EAGDFPVEVS SAAVFRCIRV 120 SSIDNAVDQY AYQTSVKIAG HIFKGILYDQ GPDDHESPRY SNINTNNMAG ESSSTGFQLQ 180 QSPNLPITTA TTSPHPPAST YPNLLFSALN MPGTQFFQYP KSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G51060.1	6e-47	SRS family protein