PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU10708.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TALE

Protein Properties

Length: 666aa MW: 73783.4 Da PI: 5.0175

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU10708.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.2	1.6e-09	432	469	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ ++++ LA+++gLt +qV++WF N R + PHU10708.1 432 FEHflHPYPKDSDKTMLARQTGLTRSQVSNWFINARVR 469 554459******************************88 PP
2	BELL	125.1	2.8e-40	294	365	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e+qe+q+k +kLls+l+e+d+rY+qy++q+q+v+ssF++vag g+akpYt+lAl++iSrhFrcL+d i++qi PHU10708.1 294 EKQEMQNKLTKLLSMLDEIDRRYRQYYHQMQIVVSSFDVVAGDGAAKPYTALALQTISRHFRCLRDTICDQI 365 689********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 666 aa Download sequence
MATYFPSPNN QRDAETFQYL RQSLPDSYSE ASNAPENMMV FMNYSSSGTY SDMLAGTSQQ 60 QNSCIDIPPV GATCSNTSQE EILSNLGGSQ MGIQDFSAWR DSRNEMLAVH SMGAADTVLQ 120 VAQNVPGQGL SLSLGSNIPS AIGISHVRSQ NPNHGFMSFL SPASSVPGEG SGVNVSFGGD 180 DNSQPKQQTN ADYLPPDYPG SNSDVMKGYN SPYGTSSIAR TIPSSKYLKA AQYLLDEVVS 240 VRKAIKEQTS KKELRKDSRE SDVDSKNKSS DPSANGSSNP HESKNNQNEL SATEKQEMQN 300 KLTKLLSMLD EIDRRYRQYY HQMQIVVSSF DVVAGDGAAK PYTALALQTI SRHFRCLRDT 360 ICDQIRASRR SLGEQEASEN SKAIGISRLR FVDQHIRQQR ALQQLGMMQQ HAWRPQRGLP 420 ETSVSVLRAW LFEHFLHPYP KDSDKTMLAR QTGLTRSQVS NWFINARVRL WKPMVEEMYK 480 EEAGDAEIDS NSSSEIASRR ATEGSKVEER EEMHQNAASE FEQYNNGQIL ESKSNHEADV 540 EMEGANNVET QSQSGMENQR DEPPPTMDNC TPFQDAFAQS NNRFSEFGSF GSGNVLPHGV 600 SLTLGLQQGE GSNLPMSIET HVSYVPLRAD DIYSTAPPTM VPETAEFNCL DSGNRQHPFW 660 LLPSAT

Sequence ? help Back to Top

Protein Sequence Length: 666 aa Download sequence

MATYFPSPNN QRDAETFQYL RQSLPDSYSE ASNAPENMMV FMNYSSSGTY SDMLAGTSQQ  60
QNSCIDIPPV GATCSNTSQE EILSNLGGSQ MGIQDFSAWR DSRNEMLAVH SMGAADTVLQ  120
VAQNVPGQGL SLSLGSNIPS AIGISHVRSQ NPNHGFMSFL SPASSVPGEG SGVNVSFGGD  180
DNSQPKQQTN ADYLPPDYPG SNSDVMKGYN SPYGTSSIAR TIPSSKYLKA AQYLLDEVVS  240
VRKAIKEQTS KKELRKDSRE SDVDSKNKSS DPSANGSSNP HESKNNQNEL SATEKQEMQN  300
KLTKLLSMLD EIDRRYRQYY HQMQIVVSSF DVVAGDGAAK PYTALALQTI SRHFRCLRDT  360
ICDQIRASRR SLGEQEASEN SKAIGISRLR FVDQHIRQQR ALQQLGMMQQ HAWRPQRGLP  420
ETSVSVLRAW LFEHFLHPYP KDSDKTMLAR QTGLTRSQVS NWFINARVRL WKPMVEEMYK  480
EEAGDAEIDS NSSSEIASRR ATEGSKVEER EEMHQNAASE FEQYNNGQIL ESKSNHEADV  540
EMEGANNVET QSQSGMENQR DEPPPTMDNC TPFQDAFAQS NNRFSEFGSF GSGNVLPHGV  600
SLTLGLQQGE GSNLPMSIET HVSYVPLRAD DIYSTAPPTM VPETAEFNCL DSGNRQHPFW  660
LLPSAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34610.2	1e-129	TALE family protein