PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU11029.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

C2H2

Protein Properties

Length: 165aa MW: 18329.1 Da PI: 9.6588

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU11029.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14	0.00015	40	62	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H PHU11029.1 40 FSCNYCRRKFYSSQALGGHQNAH 62 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 165 aa Download sequence
MSYEPNTTLN LSLSRNEILL DQSSSSSSSS PLSPNEPRIF SCNYCRRKFY SSQALGGHQN 60 AHKLERTLAK KSREMTTSSL LPHSGWSNNN NNNNNNNNQT SGSLSPSGPS HGGRGYGYGH 120 GARFVTNNDI MRYGRREMVI NYGSMKNGES VHQEDFGHLD LSLRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57520.1	5e-24	C2H2 family protein