PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU11234.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TALE

Protein Properties

Length: 420aa MW: 47000.6 Da PI: 6.0513

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU11234.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.3	1.1e-07	363	396	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL +q+ +WF N+R + PHU11234.1 363 KWPYPTEEDKARLVQETGLHLKQINNWFINQRKR 396 469*****************************87 PP
2	ELK	27.2	8.6e-10	317	338	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y++++ ++++E++ PHU11234.1 317 ELKHELKQGYKEKIFDIREEIL 338 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence
MEFQDHFSQE IALHHHQQQQ QQQQHPNVAV LRSMLPNESP DNNNNNNNNN KLQPTWLNTS 60 LLRQQHFAAA AAAAASSPSG GGNNNNNNFL HLQTSNSDSS NSNQWLSPTG GELSKMNQAA 120 AGGGGGGEDS NNINNSNTNN NNEEEHSWER EKCKADILNH PLYDQLLSAH VSCLRIATPV 180 DQLPRIDAQL AQSQNVVAKY SVLGQGQPPL DDKDLDQFMT HYVLLLSSFK EQLQQHVRVH 240 AMEAVMACWE LEQSLQSLTG VAPGEGTGAT MSDDDDDQAD SDTNFLDGGF DGPDSMGFGP 300 LVPTESERSL MERVRQELKH ELKQGYKEKI FDIREEILRK RRAGKLPGDT TSVLKAWWQS 360 HSKWPYPTEE DKARLVQETG LHLKQINNWF INQRKRNWHS NPSTSSSQKS KRKSAGEIKQ

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence

MEFQDHFSQE IALHHHQQQQ QQQQHPNVAV LRSMLPNESP DNNNNNNNNN KLQPTWLNTS  60
LLRQQHFAAA AAAAASSPSG GGNNNNNNFL HLQTSNSDSS NSNQWLSPTG GELSKMNQAA  120
AGGGGGGEDS NNINNSNTNN NNEEEHSWER EKCKADILNH PLYDQLLSAH VSCLRIATPV  180
DQLPRIDAQL AQSQNVVAKY SVLGQGQPPL DDKDLDQFMT HYVLLLSSFK EQLQQHVRVH  240
AMEAVMACWE LEQSLQSLTG VAPGEGTGAT MSDDDDDQAD SDTNFLDGGF DGPDSMGFGP  300
LVPTESERSL MERVRQELKH ELKQGYKEKI FDIREEILRK RRAGKLPGDT TSVLKAWWQS  360
HSKWPYPTEE DKARLVQETG LHLKQINNWF INQRKRNWHS NPSTSSSQKS KRKSAGEIKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.1	1e-148	TALE family protein