PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU11280.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

ARR-B

Protein Properties

Length: 513aa MW: 57832.8 Da PI: 5.5657

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU11280.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	63	5.6e-20	213	269	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGG..sekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWt+eLH++F++a qL +k +Pk+ile+m+ + +t+e+v+SHLQk+R+ PHU11280.1 213 KNRMRWTKELHKKFMDAYYQLEAdtFDKVVPKRILEIMNEPEVTREKVASHLQKFRS 269 78*****************652258***************************7 PP
2	Myb_DNA-binding	26.3	1.7e-08	215	268	1	48
TSSS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.....tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e+++++ da ql + +k+I + m+ t++ + s++qk++ PHU11280.1 215 RMRWTKELHKKFMDAYYQLEADtfdkvVPKRILEIMNePEVTREKVASHLQKFR 268 89**********************************6678888*****97 PP
3	Response_reg	76	1.4e-25	30	139	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl +dD+ + +++l ++l+k gy +v++++d+ ale+l++++ +D++++D+ ++dG++ll+ i e +++p+i+ +a++e + ++ea+k Ga+ PHU11280.1 30 VLAIDDNVVCLKVLGSILQKCGY-IVTTTRDANVALEILRKNKenFDIVITDVVRDDIDGFKLLEAIGLEMMDIPVIMTSANDERKIIVEAIKHGAS 125 7899*****************.***********888778******************99999********************* PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l+Kp+++e++ + PHU11280.1 126 DYLVKPIKMEDVKN 139 *******99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 513 aa Download sequence
MSHSVTNECS NPPNLTKEKE TSKSPKGLKV LAIDDNVVCL KVLGSILQKC GYIVTTTRDA 60 NVALEILRKN KENFDIVITD VVRDDIDGFK LLEAIGLEMM DIPVIMTSAN DERKIIVEAI 120 KHGASDYLVK PIKMEDVKNI FQHVTISINK NKATQDDHSS APISCNDTNE FGVQESSSSI 180 LPHKRISQQD NDDDEETNND QSSDESCPPR KKKNRMRWTK ELHKKFMDAY YQLEADTFDK 240 VVPKRILEIM NEPEVTREKV ASHLQKFRSG LKKHKENLNQ DSTISTSCYP PGHYVTKPEI 300 PNMFANQKPY LVPRTQQIPN MFANQQNAAN FAPISTYPRL DNFIYRPVLA TNAISQPDLN 360 GLQYHYQNHH PRWIMDDEML NSMPHHSVYL YPYSSIPVSM NYVGAPDHQM FGDLPVSHQM 420 TPSAPFDSSG LVVSSTHGQV QGGNLVSFND RGVQDFSVGA NSSPINFNGV QIDDINDDSE 480 RRSNVLENNS SSLDDDDLST MVQQFQDNSA PRL

Sequence ? help Back to Top

Protein Sequence Length: 513 aa Download sequence

MSHSVTNECS NPPNLTKEKE TSKSPKGLKV LAIDDNVVCL KVLGSILQKC GYIVTTTRDA  60
NVALEILRKN KENFDIVITD VVRDDIDGFK LLEAIGLEMM DIPVIMTSAN DERKIIVEAI  120
KHGASDYLVK PIKMEDVKNI FQHVTISINK NKATQDDHSS APISCNDTNE FGVQESSSSI  180
LPHKRISQQD NDDDEETNND QSSDESCPPR KKKNRMRWTK ELHKKFMDAY YQLEADTFDK  240
VVPKRILEIM NEPEVTREKV ASHLQKFRSG LKKHKENLNQ DSTISTSCYP PGHYVTKPEI  300
PNMFANQKPY LVPRTQQIPN MFANQQNAAN FAPISTYPRL DNFIYRPVLA TNAISQPDLN  360
GLQYHYQNHH PRWIMDDEML NSMPHHSVYL YPYSSIPVSM NYVGAPDHQM FGDLPVSHQM  420
TPSAPFDSSG LVVSSTHGQV QGGNLVSFND RGVQDFSVGA NSSPINFNGV QIDDINDDSE  480
RRSNVLENNS SSLDDDDLST MVQQFQDNSA PRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	2e-52	ARR-B family protein