PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU11282.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 192aa    MW: 20891.2 Da    PI: 5.2068
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU11282.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.82.7e-181262155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                ++ykGVr++  +g+W+AeIr+p   + r + ++lg+f+  ++Aa a++aa++kl+g
  PHU11282.1 12 CKYKGVRQRT-WGKWFAEIREP---N-RgACVWLGTFDNSYDAAVAYDAAALKLYG 62
                79*****999.**********8...3.35*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MKGKGGPENA TCKYKGVRQR TWGKWFAEIR EPNRGACVWL GTFDNSYDAA VAYDAAALKL  60
YGPDKAQLNL PHLYNIPAQA QHESSRPAVT PTLAPVPADP SPSIYNVASP STWNVKNDPS  120
VYFNNDFSST NFSATSISLD MNEKADHEEF VENVSSRPAP TLAPAPFSLV PSPSVYNVAS  180
PSTWNVENDP SL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.12e-29ERF family protein