PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU11351.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family M-type_MADS
Protein Properties Length: 109aa    MW: 12322.4 Da    PI: 10.133
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU11351.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF39.66.8e-13545545
                SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
      SRF-TF  5 nksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                n++      sk ++ + KKA+ELS+LC++e+a+iifs +g+
  PHU11351.1  5 NSRAEDMKISKMQKSLCKKANELSILCGIEIAIIIFSISGQ 45
                5555566679999************************8885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 109 aa     Download sequence    
MEKKNSRAED MKISKMQKSL CKKANELSIL CGIEIAIIIF SISGQPILFG KPDVESVVHH  60
FLEAKHPAAL RNYMKMKKKE GRKKKKEKGK SIEGNSDDFE SPSEFAPKD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18287RKKKKE
28288RKKKKEK