PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU11443.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 435aa MW: 50830.9 Da PI: 8.4193

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU11443.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	45.6	1.2e-14	35	106	18	95
--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 18 lpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 +p f ++ +gk +k ++l+d+ g W++++ + +++++++ GW +F k+n+Lk gDf++F +dg++ f ++k PHU11443.1 35 IPPGFR-DYkNGK--LPKRVSLRDRLGHMWSIRV--ANVGREIYFQYGWPKFIKDNKLKHGDFLIFDYDGNKIF--NIK 106 777774.663334..7889*************..99999**************************99988..444 PP
2	B3	31.9	2.4e-10	301	367	10	79
HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-E CS B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDf 79 + ++++l++p + +++++++ + t++++d+ gr++e ++ +k gr++l +GW++F++ n ++ +D PHU11443.1 301 SKRRNQLYVPVDVVRDYKHE--FPSTMSIRDSAGREFETRVVKWKD-GRIWLVGGWRSFCRWNLVQKNDK 367 567899*********865..7889***********77776.5899**********9999985 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MVSTRSREVR DAEPSPEDRL LTRGRGRGSG HPKKIPPGFR DYKNGKLPKR VSLRDRLGHM 60 WSIRVANVGR EIYFQYGWPK FIKDNKLKHG DFLIFDYDGN KIFNIKLLGS NGYEKKEDGC 120 LKLGVLEESE EMNIEHQKCV EPKGKNWARY SNRSSYSNRS DKDSLEDGDK EYDQTKKMRC 180 SKWKDVQEEK VYEEEDEFEE EEEEDKEETK KATYSKRKHV EEEGYLDYDD DQEKEAEETE 240 EEEVNERSGT FNNKESRLKA SWKRSTDHKV NDLHDTFGAD IFKSGCAIQP KNPYFVAKVQ 300 SKRRNQLYVP VDVVRDYKHE FPSTMSIRDS AGREFETRVV KWKDGRIWLV GGWRSFCRWN 360 LVQKNDKWIM PPYKSNEKNT LARGSTTNGT TLNKSFLLMR CRPNIEPFTT TLGVPPIKTI 420 PPQAPPFGVN CTQSP

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MVSTRSREVR DAEPSPEDRL LTRGRGRGSG HPKKIPPGFR DYKNGKLPKR VSLRDRLGHM  60
WSIRVANVGR EIYFQYGWPK FIKDNKLKHG DFLIFDYDGN KIFNIKLLGS NGYEKKEDGC  120
LKLGVLEESE EMNIEHQKCV EPKGKNWARY SNRSSYSNRS DKDSLEDGDK EYDQTKKMRC  180
SKWKDVQEEK VYEEEDEFEE EEEEDKEETK KATYSKRKHV EEEGYLDYDD DQEKEAEETE  240
EEEVNERSGT FNNKESRLKA SWKRSTDHKV NDLHDTFGAD IFKSGCAIQP KNPYFVAKVQ  300
SKRRNQLYVP VDVVRDYKHE FPSTMSIRDS AGREFETRVV KWKDGRIWLV GGWRSFCRWN  360
LVQKNDKWIM PPYKSNEKNT LARGSTTNGT TLNKSFLLMR CRPNIEPFTT TLGVPPIKTI  420
PPQAPPFGVN CTQSP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66980.1	7e-14	B3 family protein