PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU11552.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

FAR1

Protein Properties

Length: 239aa MW: 27598.5 Da PI: 4.7822

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU11552.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	28.2	6.2e-09	108	148	51	91
FAR1 51 errtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 + +++++r++Cka+++ + ++dg v+k+ leHnHel p PHU11552.1 108 VEARNQSKRVDCKARVNYHVMNDGSCIVAKVILEHNHELEP 148 456899********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MDHNYSNNLL RAILNDVLGW EGSDILHGNE HSYGGYADGP DRYLDTDDED LQNLTDEEMN 60 RSHQLFQDED LNIFNSEEDL YGEDGVVEEE GPMHDNSYTD EQYTVGPVEA RNQSKRVDCK 120 ARVNYHVMND GSCIVAKVIL EHNHELEPAL LHFLPCHRKL SRTLKRSLTA HDITGLRPSK 180 SIRLLEVEVG GPERMTCTPK DYRNYILQQR RLRTLSSDTA ALHRFFVDMQ SKNEIFFTQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-11	FAR1 family protein