PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU11657.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 235aa    MW: 26422.7 Da    PI: 4.9602
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU11657.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.42.6e-133880754
                HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH  7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                  Er+RR+++N++++ Lr ++P+ +      K++Ka+i + A++YI++L
  PHU11657.1 38 VSERNRRKKVNERLFALRAVVPNiS------KMDKASIIKDAIDYIQNL 80
                57*********************66......****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MFLQSEELDS YFDEAISSYY DSSSPDGAQS SMASKNIVSE RNRRKKVNER LFALRAVVPN  60
ISKMDKASII KDAIDYIQNL HEQERRIRAE ILVLESGRSK KNSDVEFDQD GSFDSKPKRS  120
KRLEQKYEYD SSGSTTRSSP SSFPVDVLEL RVSSMGENTV VVSLTCSKRT DTMIKVCEVF  180
ESLNIKIISA NITAFSGRLL KTAFIEADEE EKDILKLRIE TAIASLNDAD SPMSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.11e-82bHLH family protein