PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU11904.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

FAR1

Protein Properties

Length: 848aa MW: 97662.4 Da PI: 6.9704

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU11904.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	85	1.2e-26	90	192	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.............tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnH 87 fY+eYA+++GF++ +++s++sk+++e+++++f Cs++g++++ +k+ e++ +ra +t+Cka+++vk++ dgkw ++++e+eHnH PHU11904.1 90 FYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKRDYEKSanrprsrqgnkqdPENATGRRACAKTDCKASMHVKRRPDGKWIIHRFEKEHNH 188 9************************************9999999899999888776555556699****************************** PP FAR1 88 elap 91 el p PHU11904.1 189 ELLP 192 *975 PP

Sequence ? help Back to Top
Protein Sequence Length: 848 aa Download sequence
MDIDLRLPSQ DHDKEEEEEQ NGIINMLDNE EKMHSDDRMH GMLVIEEKMH AEDGGDMNTP 60 IGTMIEFKED VNLEPLAGME FESHGEAYAF YQEYARSMGF NTAIQNSRRS KTSREFIDAK 120 FACSRYGTKR DYEKSANRPR SRQGNKQDPE NATGRRACAK TDCKASMHVK RRPDGKWIIH 180 RFEKEHNHEL LPAQAVSEQT RRMYAAMARQ FAEYKNVVGL KSDTKGPFEK GRNSAMEGGD 240 INVLLEFFIQ MQNLNSNFFY AVDVGEDQRV RNLFWVDAKA RHDYANFNDV VSFDTAYVRN 300 KYKMPLALFV GVNQHFQFML LGCALVSDES AATFFWVMRT WLKAMGGQAP KTVITDHDQV 360 LKSVIPEALP LSLHYFCLWH ILGKVSDTLN HIIKQNEKFM PKFEKCIHRS WTDEEFEKRW 420 RKLVDKFDLR EAELIHSLYE ERMKWAPTFI RDVLLAGMSM VQRSESVNSF FDKYVHKKTT 480 VQELVKQYES ILQDRYEEEA KADSDTWNKQ PALKSPSPFE KQVAGLYTNA VFKKFQAEVL 540 GAVACIPKRE KQDATTITYR VQDFEKTQEF IVTLDEMKSE ISCLCHLFEF KGYLCRHTLI 600 VLQICRVSSI PSQYILKRWT KDAKNKYSMT DGSEDLQSRF QRYNELCHRA MKLSEEGSLS 660 QESYSFALRA LDDAFGSCVT FNNSNKNMLE AGTSSASGIL CIEDDNQSRS MSKTNKKKNN 720 FTKKRKVNSE PDVMAVGPAD SLQQMDKLNS RPVTLDGYFG PQQSVQGMVQ LNLMAPTRDN 780 YYGNQQTIQG LGQLNSIAPT HDGYYGAQPT MHGLGQMDFF RTPSFSYGIR DEPNVRSAQL 840 HDETSRHP

Sequence ? help Back to Top

Protein Sequence Length: 848 aa Download sequence

MDIDLRLPSQ DHDKEEEEEQ NGIINMLDNE EKMHSDDRMH GMLVIEEKMH AEDGGDMNTP  60
IGTMIEFKED VNLEPLAGME FESHGEAYAF YQEYARSMGF NTAIQNSRRS KTSREFIDAK  120
FACSRYGTKR DYEKSANRPR SRQGNKQDPE NATGRRACAK TDCKASMHVK RRPDGKWIIH  180
RFEKEHNHEL LPAQAVSEQT RRMYAAMARQ FAEYKNVVGL KSDTKGPFEK GRNSAMEGGD  240
INVLLEFFIQ MQNLNSNFFY AVDVGEDQRV RNLFWVDAKA RHDYANFNDV VSFDTAYVRN  300
KYKMPLALFV GVNQHFQFML LGCALVSDES AATFFWVMRT WLKAMGGQAP KTVITDHDQV  360
LKSVIPEALP LSLHYFCLWH ILGKVSDTLN HIIKQNEKFM PKFEKCIHRS WTDEEFEKRW  420
RKLVDKFDLR EAELIHSLYE ERMKWAPTFI RDVLLAGMSM VQRSESVNSF FDKYVHKKTT  480
VQELVKQYES ILQDRYEEEA KADSDTWNKQ PALKSPSPFE KQVAGLYTNA VFKKFQAEVL  540
GAVACIPKRE KQDATTITYR VQDFEKTQEF IVTLDEMKSE ISCLCHLFEF KGYLCRHTLI  600
VLQICRVSSI PSQYILKRWT KDAKNKYSMT DGSEDLQSRF QRYNELCHRA MKLSEEGSLS  660
QESYSFALRA LDDAFGSCVT FNNSNKNMLE AGTSSASGIL CIEDDNQSRS MSKTNKKKNN  720
FTKKRKVNSE PDVMAVGPAD SLQQMDKLNS RPVTLDGYFG PQQSVQGMVQ LNLMAPTRDN  780
YYGNQQTIQG LGQLNSIAPT HDGYYGAQPT MHGLGQMDFF RTPSFSYGIR DEPNVRSAQL  840
HDETSRHP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22170.2	0.0	FAR1 family protein