PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU11984.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 1267aa MW: 143165 Da PI: 8.8781

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU11984.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	86.3	5.7e-27	74	154	54	128
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel......vglkktLvfykgrapkgektdWvmheyrl 128 ++kewyfFs r +ky+++ r+nr+t sg+Wkatg dk+v+s+++++ +glkk+Lv+y+g+a kg+ktdW+mhe+rl PHU11984.1 74 DNKEWYFFSMRGRKYKNSARPNRVTGSGFWKATGIDKPVYSTTTTTseisecIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 154 568************************************83333556677*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1267 aa Download sequence
MCHLVLILTL TRHSRMNDPS EGDYNTPRFE PLQNFLGFGL SGLGITQRYN SYPCIWVRGW 60 LDGSLVRWVV RVGDNKEWYF FSMRGRKYKN SARPNRVTGS GFWKATGIDK PVYSTTTTTS 120 EISECIGLKK SLVYYRGSAG KGTKTDWMMH EFRLPPIWKA TSNGELPYPK NIAPEAKNTV 180 GSKWIYKIKY PANGEVVRFK SRLVVKVYSQ QEGLDYHETH SPVAKMVTVR RFQETWENKV 240 CKILKSLYGL KQASSQWNLY LTNALLDAGF TQSAHDYSLF TLHKGIEVLR STSGVILNQR 300 KYILELISNT SLSGSKPALT PLESNLRLTT IEYDQSTGIH GDELLSDVSS YQRLMAKLMY 360 DTITRPYISF VVQTLSQFMQ YPKKSYWEAT TKVFRYLKGF VGQSIWLKAD FSIALTCWCD 420 SDWDVFPNTR RPVTGYTVHF GESLIFWKSK KQHTVSRSSI ETDYRIMAST VDEITWEFYF 480 GIFVQGKGFF GLLDGSARPP TDAKELDLWK LNNAKGSHTL ALDVMLVAVL HEETILGTQA 540 AMESTPLPSI ALLAGKSTTI ALIGNTKRSV KYYECQDIGH IAANCPKKKN ICAYYKITGH 600 HISDCRRRPN RSRTAHQDYQ TNVTTSFGSF PAGTSNSIKS TWHLYSGASN HMTGDLSQFS 660 LLSSCVSKYV IHIANEHTLP ASGIGSIGNL SNVLYVPNLN ANLVSVGQLV DQNCFIKFSP 720 NGYVVQNLKT GMTMAMWCRF GRIFLLELVR HHLHHCYLSI YIVDVTRSNK LLTLWHNRIG 780 HPHSSRLHHM LKSCLPAIHH IYYSFLLACT NYASSKSQKL PFPSSSSAYE DPFDLVHSDV 840 WGPSPNLESL SFLYKFDDDV VATDSQLESS EQPVDYDNED LQPSSPSSTD PLLESPEQPM 900 NNSNEALQLL SLSGINSISS FSSLEEGSSH PITPPYKPTD GVLIGNKWVY SIKMKADGTI 960 DRYKDRLVAQ GYKQKYGVDY EETFAPIAKM TTYASDLVAT AGLTDEKDIY TPMEINTKYK 1020 KADGEPFSDP TLYRQLVGSL VYPVGTSLIS WKCKKQSRMY KSFTEVEYWD MSAASWEIIC 1080 VRRVLSELGV AIISPTVLLA DNTSAIKIAT NPVQHKNTKH IKEVWTLCRI FKRISNYKRF 1140 IPDWKQQQPI VKQSFGATSS KACSLHSEIS DDHSNNVINF KKMAFSQKNI NNASSGENLN 1200 YQVDQRNSFD NNSQPITMPQ SLFTSSNSSF WNTSATDQEY LLSDGNWDEL KSVVDLAIDP 1260 RSLFGFK

Sequence ? help Back to Top

Protein Sequence Length: 1267 aa Download sequence

MCHLVLILTL TRHSRMNDPS EGDYNTPRFE PLQNFLGFGL SGLGITQRYN SYPCIWVRGW  60
LDGSLVRWVV RVGDNKEWYF FSMRGRKYKN SARPNRVTGS GFWKATGIDK PVYSTTTTTS  120
EISECIGLKK SLVYYRGSAG KGTKTDWMMH EFRLPPIWKA TSNGELPYPK NIAPEAKNTV  180
GSKWIYKIKY PANGEVVRFK SRLVVKVYSQ QEGLDYHETH SPVAKMVTVR RFQETWENKV  240
CKILKSLYGL KQASSQWNLY LTNALLDAGF TQSAHDYSLF TLHKGIEVLR STSGVILNQR  300
KYILELISNT SLSGSKPALT PLESNLRLTT IEYDQSTGIH GDELLSDVSS YQRLMAKLMY  360
DTITRPYISF VVQTLSQFMQ YPKKSYWEAT TKVFRYLKGF VGQSIWLKAD FSIALTCWCD  420
SDWDVFPNTR RPVTGYTVHF GESLIFWKSK KQHTVSRSSI ETDYRIMAST VDEITWEFYF  480
GIFVQGKGFF GLLDGSARPP TDAKELDLWK LNNAKGSHTL ALDVMLVAVL HEETILGTQA  540
AMESTPLPSI ALLAGKSTTI ALIGNTKRSV KYYECQDIGH IAANCPKKKN ICAYYKITGH  600
HISDCRRRPN RSRTAHQDYQ TNVTTSFGSF PAGTSNSIKS TWHLYSGASN HMTGDLSQFS  660
LLSSCVSKYV IHIANEHTLP ASGIGSIGNL SNVLYVPNLN ANLVSVGQLV DQNCFIKFSP  720
NGYVVQNLKT GMTMAMWCRF GRIFLLELVR HHLHHCYLSI YIVDVTRSNK LLTLWHNRIG  780
HPHSSRLHHM LKSCLPAIHH IYYSFLLACT NYASSKSQKL PFPSSSSAYE DPFDLVHSDV  840
WGPSPNLESL SFLYKFDDDV VATDSQLESS EQPVDYDNED LQPSSPSSTD PLLESPEQPM  900
NNSNEALQLL SLSGINSISS FSSLEEGSSH PITPPYKPTD GVLIGNKWVY SIKMKADGTI  960
DRYKDRLVAQ GYKQKYGVDY EETFAPIAKM TTYASDLVAT AGLTDEKDIY TPMEINTKYK  1020
KADGEPFSDP TLYRQLVGSL VYPVGTSLIS WKCKKQSRMY KSFTEVEYWD MSAASWEIIC  1080
VRRVLSELGV AIISPTVLLA DNTSAIKIAT NPVQHKNTKH IKEVWTLCRI FKRISNYKRF  1140
IPDWKQQQPI VKQSFGATSS KACSLHSEIS DDHSNNVINF KKMAFSQKNI NNASSGENLN  1200
YQVDQRNSFD NNSQPITMPQ SLFTSSNSSF WNTSATDQEY LLSDGNWDEL KSVVDLAIDP  1260
RSLFGFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43000.1	1e-37	NAC family protein