PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU12016.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family DBB
Protein Properties Length: 242aa    MW: 27322.4 Da    PI: 7.8466
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU12016.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box22.91.7e-073572537
    zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......H 37
                 C++++++ ++ +C+ ++ +lC +C  + H        H
  PHU12016.1 35 SCELCKSE-ASVYCQADNAFLCWKCDKWVHAAnflarrH 72
                6******9.*******************99545555556 PP
2zf-B_box22.91.7e-07152189537
    zf-B_box   5 kCpeHeekelqlfCedCqqllCedClleeHkg......H 37 
                  C++++++ ++ +C+ ++ +lC +C  + H        H
  PHU12016.1 152 SCELCKSE-ASVYCQADNAFLCWKCDKWVHAAnflarrH 189
                 6******9.*******************99545555556 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MCRGSKEGEE ESPPISFCKG PLEEGQESTI VSTISCELCK SEASVYCQAD NAFLCWKCDK  60
WVHAANFLAR RHIRCLLCGV CRRLTRRFLI GASSEVDFLA SVGLVQRRSR RNEDCEVIVR  120
GSKEGEEESP PISFCKGPLE EGQESTIVST ISCELCKSEA SVYCQADNAF LCWKCDKWVH  180
AANFLARRHI RCLLCGVCRR LTRRFLIGAS SEVDFLASVG LVQRRSRRNE DCEVIVRCYV  240
RN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15840.17e-11CO-like family protein