PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU12176.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 111aa MW: 12541.3 Da PI: 9.2135

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU12176.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	84.9	8.2e-27	25	78	1	54
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 kpr +Wt eLHe+Fv+av++LGG+ +AtPk+i++lm+ +++t +h+kSHLQ Y PHU12176.1 25 KPRFKWTVELHEHFVKAVNELGGPYEATPKNIVKLMDDEDITPDHIKSHLQIYQ 78 79**************************************************95 PP
2	Myb_DNA-binding	41.2	3.9e-13	29	75	3	45
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwq 45 +WT e++e +v+av++lGg+ t+k I + m + t+ ++ks++q PHU12176.1 29 KWTVELHEHFVKAVNELGGPyeaTPKNIVKLMDdEDITPDHIKSHLQ 75 7*********************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 111 aa Download sequence
MPESSKKHKG ETSEKVGPSH DLNRKPRFKW TVELHEHFVK AVNELGGPYE ATPKNIVKLM 60 DDEDITPDHI KSHLQIYQGR SRSIKVQGVS CHPQVLIKAR GALCHPQVSI D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17695.1	1e-17	G2-like family protein