PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU12214.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 133aa    MW: 14820.5 Da    PI: 4.4679
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU12214.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding301.2e-095091245
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     + ++++E+ l+++ +++ G + W++Ia +++ gR++ ++  +w 
       PHU12214.1 50 LEFSEDEEILIAKMFNLVGER-WSLIAGRIP-GRSADEIEKYWK 91
                     579******************.*********.***********6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    
MADCDRSSTS DNASVVSAEF EQKLLSSRES TIDPPAVTAL ETTNKETSEL EFSEDEEILI  60
AKMFNLVGER WSLIAGRIPG RSADEIEKYW KLRIYSKSQG ESMSEILLKS KDQSQTIALK  120
EESGHSTENV KGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01380.11e-14MYB_related family protein