PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU12386.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 211aa    MW: 22680.6 Da    PI: 8.823
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU12386.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.98.1e-212473255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAaka++aa++ ++g
  PHU12386.1 24 HYRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAAKAYDAAARDFRG 73
                6********.**********8...557**********************99988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MALKNKVSSN GSENAKVNGV KEVHYRGVRK RPWGRYAAEI RDPGKKSRVW LGTFDTAEEA  60
AKAYDAAARD FRGPKAKTNF PSPFPLETLN QSPSNSSTLE SSSGETGVHA PMEVDLTRRL  120
GAVAPVFHQQ PTVAVLPNGQ PVLLFDSLWR PGVVVDKAQL SYQVAPMAIE FTGAAGGVSS  180
VSDSSSVVEE NQYVGKKGLD LDLNLAPPME I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15210.19e-29ERF family protein