PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU12727.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 235aa MW: 27447.4 Da PI: 9.7985

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU12727.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	79	1.1e-24	44	165	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvg 101 GfrFhPtd el+ +yL v +k+++ i d+y++ Pwd+ k ++++ +yfF++ +kk + ++r r++ +g Wk++ k k+v+s+kg+ g PHU12727.1 44 EGFRFHPTDRELM-KYLILFVISKPFSKLVPIVLEDLYTIGPWDIF-K-GKKDRALYFFTELKKKRTGNTRYVRSVGEGSWKSQDKGKAVCSEKGSILG 139 7**********.9******9997779999******6.3.3567899*************************************** PP NAM 102 lkktLvfykgrapkgektdWvmheyrl 128 k++L + + p + +W+m+ey++ PHU12727.1 140 YKRSLRYQNPGLPL-HDGQWLMKEYSI 165 ***9655555.799*****86 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MSLARRHPFK QPRTIPSTSY LPTTSYQTRM EYNKEVQENS AHTEGFRFHP TDRELMKYLI 60 LFVISKPFSK LVPIVLEDLY TIGPWDIFKG KKDRALYFFT ELKKKRTGNT RYVRSVGEGS 120 WKSQDKGKAV CSEKGSILGY KRSLRYQNPG LPLHDGQWLM KEYSICDDIK KHLRQRFHEY 180 NKEHYVLCRV KRKIGKDEDG IAPKETIIDE EINDIIGSND AADTLAIDIN RPFHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G46590.1	1e-23	NAC family protein