PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU12733.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 261aa    MW: 29931.5 Da    PI: 9.9819
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU12733.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.82.6e-1099146554
                 HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                    +Er+RR+++ + +++Lr l+P+       +K s ++ Le+ v+Y+k+L
  PHU12733.1  99 RRDVERQRRRDMAKLYQRLRLLIPSkY---LMGKRSISDHLEQIVDYVKDL 146
                 5689*********************77...9******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MDDSEFDFGQ LDQLFNFLSS LPPPPTPPTT FQNQDSSISL QTQNSNHVPK KKPIVTNHHH  60
HHHVIKKKPI KISNINNDDQ VQNPPKEKEK IAEKKKVLRR DVERQRRRDM AKLYQRLRLL  120
IPSKYLMGKR SISDHLEQIV DYVKDLRKDI EDLERKREAL KQLKSTICSS QLAPSSSSMK  180
LNDDNEDRII VKSCNEGVEI CIKGELSLSK VLKVVLKEGF IVSSCVSSTV DQSLFHIIQS  240
KMNTRGDIDL AVLRSKLMSL S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62975.15e-15bHLH family protein