PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU12739.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

DBB

Protein Properties

Length: 297aa MW: 32129 Da PI: 4.767

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU12739.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	17.6	8.2e-06	4	47	5	42
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ +e e++ C ++ lC +C ++ H H++vpl PHU12739.1 4 QCNVCEVAEANVLCCADEAALCWSCDEKVHAAnklaskHQRVPL 47 7***999*******************66899999999986 PP
2	zf-B_box	28.4	3.5e-09	53	90	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg..H 37 ++++C+ ++e +fC +++ llC++C ++H H PHU12739.1 53 SMPMCDICQETVGYFFCLEDRALLCRKCDIAIHTAnpH 90 689******9*******************55674 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
MKIQCNVCEV AEANVLCCAD EAALCWSCDE KVHAANKLAS KHQRVPLSAS SSSMPMCDIC 60 QETVGYFFCL EDRALLCRKC DIAIHTANPH VAVHQRFLLT GVKVGLEPVD PGGVSSAGTS 120 QSIQKVSEPE SASLFKRNAP VSLDAQINKV LPPQASGVGD FAPTKFPFSG GSEAGSMPQW 180 QFDEFIGLND FNHNYGYMDN GTSKADNGKL GESDSSSLLR VDDEELDGDE CLGQVPDTSW 240 AVPQVPSPPT ASGLYWPKTY QNPFDCAVFV PDISYSPSSN FQQQPPSGAR LKRRRQS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	2e-97	DBB family protein