PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU12927.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NF-YB

Protein Properties

Length: 239aa MW: 27418.4 Da PI: 6.2216

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU12927.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	67.1	3.4e-21	1	76	17	92
NF-YB 17 mkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyre 92 m+k+lP ++ i +d e +q+ vs fi +t +a++ c+ +krk ++++d++wa+ ++G+++y e l+ yl+ky + PHU12927.1 1 MHKTLPMHTTINDDVVEEIQKIVSYFIHRITIKANEYCHMDKRKIVTAEDIIWAMNNVGLHNYGELLTHYLHKYHQ 76 89************************************************************************86 PP
2	NF-YB	38	3.9e-12	129	164	57	92
NF-YB 57 ekrktingddllwalatlGfedyveplkvylkkyre 92 + rkt++++d+lwa+ ++G+++yve l+ yl+kyr PHU12927.1 129 NVRKTLTAEDILWAMNNVGLNNYVEFLTDYLHKYRR 164 67********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MHKTLPMHTT INDDVVEEIQ KIVSYFIHRI TIKANEYCHM DKRKIVTAED IIWAMNNVGL 60 HNYGELLTHY LHKYHQENSM HYLRPNIMQP NAPSSLILPI NSVPMMSYGY PHFPPNVLLN 120 DPVAAVMTNV RKTLTAEDIL WAMNNVGLNN YVEFLTDYLH KYRRENSMHY LRPAIVPPST 180 PSSLILPINS VPMMSYVYAQ FLPNVLLNDS VAAVMTNVRN ENMVTENDED PDSSESSSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47670.2	2e-21	NF-YB family protein