PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU12936.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NF-YB

Protein Properties

Length: 186aa MW: 20507.8 Da PI: 5.121

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU12936.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	180.9	1.1e-56	24	119	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 reqdrflPianvsrimkk+lPanakiskdake+vqecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+y+eplk+yl+++r+leg+k PHU12936.1 24 REQDRFLPIANVSRIMKKALPANAKISKDAKEVVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYIEPLKIYLQRFRDLEGQK 119 89*******************************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 186 aa Download sequence
MADSDNESGG HRENNSNSIE SSLREQDRFL PIANVSRIMK KALPANAKIS KDAKEVVQEC 60 VSEFISFITG EASDKCQREK RKTINGDDLL WAMTTLGFEE YIEPLKIYLQ RFRDLEGQKS 120 GLTGEKDNGG SVNMSSSYVE EYGMMMMGGQ HHQGHAYGTG VYSQAAENGA GVGTAESRFP 180 DVGRPR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14540.1	2e-72	NF-YB family protein