PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU12994.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 244aa    MW: 26746.5 Da    PI: 7.0622
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU12994.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.77.9e-203483255
         AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +++GVr ++ +gr++AeIrd ++    ++r++lg+f++ae+Aa+a++aa++ l+g
  PHU12994.1 34 RFRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDAAARTLRG 83
                69*******.**********883....5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MRRGRAAAAA ARQIPAPASV AGEINGSGGS KEVRFRGVRK RPWGRFAAEI RDPWKKTRVW  60
LGTFDSAEDA ARAYDAAART LRGPKAKTNF PSDTTNNNNL LQYANHFHHH EMNVNVNDAL  120
VDSRLYPQDH HHIISQRPTS SSMSSTVESF SGPRPPPLRQ HTAAPSRKYP RSPPVVPDDC  180
HSDCDSSSSV IDDGDGENDN VNIASSSFRK LLPFDLNFPP PMDDSVGDDA YADADDLHCT  240
ALCL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.18e-32ERF family protein