PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU13059.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 208aa    MW: 23353.7 Da    PI: 8.7293
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU13059.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM43.69.2e-14358085128
         NAM  85 atgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                 atg dk+++++   +e +glkk+Lv+y+g+a kg+ktdW+mhe+rl
  PHU13059.1  35 ATGIDKPIYNStaCHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 80 
                 89*******98777778***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MRGTSNPSWV WATTPGCGPM RGTSNFLGHD WAQLATGIDK PIYNSTACHE CIGLKKSLVY  60
YRGSAGKGTK TDWMMHEFRL PAENDKSTKH IQAKSIAQEA SLTVYSLYAV AMAVAKVASD  120
VKAGDIKVLF VKPLVYWTRF FIISTAFSRP QSDAIGTRIR DMVEEQYGKV ASGDSKPNSW  180
TLLDFGDVVV HIFLPQQREY YYLEEFYL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12910.13e-20NAC family protein