PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU13079.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 340aa    MW: 38823.4 Da    PI: 8.0726
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU13079.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM174.92.3e-54181451128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 
                 lppGfrFhPtdeelvv+yLkkkv++ ++++ ++i+evd+yk++Pw+Lp+k+  +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+v+++ +++
  PHU13079.1  18 LPPGFRFHPTDEELVVHYLKKKVATAPIPV-DIIAEVDLYKFDPWELPAKAIFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVFTSgGNK 115
                 79****************************.99***************7777899**************************************997778 PP

         NAM  99 lvglkktLvfykgrapkgektdWvmheyrl 128
                 +vg+kk Lvfy g+ pkg+kt+W+mheyr+
  PHU13079.1 116 KVGVKKALVFYGGKPPKGVKTNWIMHEYRV 145
                 8***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MESTDSSTAT RHQQPHQLPP GFRFHPTDEE LVVHYLKKKV ATAPIPVDII AEVDLYKFDP  60
WELPAKAIFG EQEWYFFSPR DRKYPNGARP NRAATSGYWK ATGTDKPVFT SGGNKKVGVK  120
KALVFYGGKP PKGVKTNWIM HEYRVAENKI NNKPLGCDTI ANKKGSLRLD DWVLCRIYKK  180
NNRQRPIDIH ERDDMNDIMV PPLFFQQKTQ EIKPSNYGTL LENESNNMYD GIINNTSDMI  240
INNNEQLSSK LYWNNVDETT TTTTTTTDAN NGDDGLNNMN NARITQHDQS SSIASFLSQL  300
PQNPSIQQQQ QQQQHVLGCF NDGVVFRQPY NQVTGMNWYS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15510.11e-106NAC family protein