PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU13126.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 498aa MW: 54486.7 Da PI: 6.0923

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU13126.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	17.5	7.3e-06	388	426	11	54
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+eYIk L PHU13126.1 388 VRKEKMGDRITALQQLVSPF-----GKTDTASVLSEAIEYIKFL 426 5778999********998.....8**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 498 aa Download sequence
MAEEFQLGRG NWWESTSTST ISSSSRNNKV IDSGNSSCTT PSASSTTVLS SMGSNFVNWP 60 SEIHEDIKVR SDNSSMVFLG TDSQKRYASE SSVAGGGGGG GVGQGVLSVD DPNLQMMGLG 120 LSSQGLDWNQ PFFRSEKSGS DFRSMLQEGL SSNVNYQQEG SCHEQDQNNW STQKLYHGNS 180 DDSSINDYNK QILNRGISLD HQSSTVFSGQ NNLENSVPYG SPSNMLQGLL ISDHNSQQQE 240 ANNFTSVSRS LYYNPSYNNP SNCDMNIPPT SIDVMSTSSS SSSWSKFPQF LRTSDPPKIQ 300 QWPLQPPLLP HGGTPFWSAT SAAAADDVHS GFVPSLHPQL PTNPTVDEKP KHTGEVRNTS 360 IITKKNSSET SNKRPRNEAS SPSPAFKVRK EKMGDRITAL QQLVSPFGKT DTASVLSEAI 420 EYIKFLHEQV NVLSTPYMKS GASMQHQQSG DKSNVNQEER KQDLRSRGLC LVPVSSTFPV 480 THETTVDFWT PTFGGTFR

Sequence ? help Back to Top

Protein Sequence Length: 498 aa Download sequence

MAEEFQLGRG NWWESTSTST ISSSSRNNKV IDSGNSSCTT PSASSTTVLS SMGSNFVNWP  60
SEIHEDIKVR SDNSSMVFLG TDSQKRYASE SSVAGGGGGG GVGQGVLSVD DPNLQMMGLG  120
LSSQGLDWNQ PFFRSEKSGS DFRSMLQEGL SSNVNYQQEG SCHEQDQNNW STQKLYHGNS  180
DDSSINDYNK QILNRGISLD HQSSTVFSGQ NNLENSVPYG SPSNMLQGLL ISDHNSQQQE  240
ANNFTSVSRS LYYNPSYNNP SNCDMNIPPT SIDVMSTSSS SSSWSKFPQF LRTSDPPKIQ  300
QWPLQPPLLP HGGTPFWSAT SAAAADDVHS GFVPSLHPQL PTNPTVDEKP KHTGEVRNTS  360
IITKKNSSET SNKRPRNEAS SPSPAFKVRK EKMGDRITAL QQLVSPFGKT DTASVLSEAI  420
EYIKFLHEQV NVLSTPYMKS GASMQHQQSG DKSNVNQEER KQDLRSRGLC LVPVSSTFPV  480
THETTVDFWT PTFGGTFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20640.1	1e-69	bHLH family protein