PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU13160.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

GeBP

Protein Properties

Length: 478aa MW: 54849.8 Da PI: 4.2159

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU13160.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	41.2	4.5e-13	244	329	12	98
DUF573 12 eivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 ++++L+ ++dfk + g sp+ +d +y+++ ++++s+++l eKi K+ f+k +k +g++p+++++ dq+ f+l+++iWg+ PHU13160.1 244 DVAILRSILDFKCHYGYSPHPpSLDLIYHIMTAVPHLEISREELREKIIAYKENFNKVRKL--EGDNPQMDRPIDQEFFDLCMRIWGK 329 589***************999********************************99..*********************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 478 aa Download sequence
MVSSSSPIPD PPQAYESVSD IMKEENEEEV VISDASPTNN CTGLVLSGRK RLRTDEKEDG 60 NATSDATKLR NGGERGKNEV DGQNENQESK QGERGKNGNQ ENKNGEEEEA GGRLLGEVYE 120 NQEENDNEEE DSRENTGGDG NVIHQNSEQN GSGNQESEGD EGDEDTENDD NQEENDDQEE 180 DEEEYELVIE EEEEEEEEEE EEEVEDEEER RRRRAAEKGK QQVSEQGGLS VTEYYVDYDA 240 DPLDVAILRS ILDFKCHYGY SPHPPSLDLI YHIMTAVPHL EISREELREK IIAYKENFNK 300 VRKLEGDNPQ MDRPIDQEFF DLCMRIWGKR KLPASEVYQS KRVFAKIEEK EKHLMSESYE 360 LKPINVPTFS MLERGGTSES KLEKEGDYDY DHDLAILKAI YHYYFNHGVI PHPPYSKNFI 420 EASVPNVKFC GQALVNKIVM LEHHFLKVMK MAVRVGYYPE IIHTICHKIF NLSMGLWG

Sequence ? help Back to Top

Protein Sequence Length: 478 aa Download sequence

MVSSSSPIPD PPQAYESVSD IMKEENEEEV VISDASPTNN CTGLVLSGRK RLRTDEKEDG  60
NATSDATKLR NGGERGKNEV DGQNENQESK QGERGKNGNQ ENKNGEEEEA GGRLLGEVYE  120
NQEENDNEEE DSRENTGGDG NVIHQNSEQN GSGNQESEGD EGDEDTENDD NQEENDDQEE  180
DEEEYELVIE EEEEEEEEEE EEEVEDEEER RRRRAAEKGK QQVSEQGGLS VTEYYVDYDA  240
DPLDVAILRS ILDFKCHYGY SPHPPSLDLI YHIMTAVPHL EISREELREK IIAYKENFNK  300
VRKLEGDNPQ MDRPIDQEFF DLCMRIWGKR KLPASEVYQS KRVFAKIEEK EKHLMSESYE  360
LKPINVPTFS MLERGGTSES KLEKEGDYDY DHDLAILKAI YHYYFNHGVI PHPPYSKNFI  420
EASVPNVKFC GQALVNKIVM LEHHFLKVMK MAVRVGYYPE IIHTICHKIF NLSMGLWG