PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU13253.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 359aa MW: 40549.2 Da PI: 8.2086

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU13253.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166	1.4e-51	14	143	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev..ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 lppGfrFhP+deel+++yL kk+++++ + ++ + evd++k+ePw++p+ + + kewyf+s+rd+kyatg r+nrat sgyWkatgkd++v++ kg PHU13253.1 14 LPPGFRFHPRDEELICDYLMKKIDQSPDQQQQYpfLIEVDLNKSEPWEIPEVACVGGKEWYFYSQRDRKYATGLRTNRATVSGYWKATGKDRAVVR-KG 111 79**********************96665533499*********7666789**********************************9.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrle 129 +lvg++ktLvfy+grapkg+k+dWvmhe+rle PHU13253.1 112 SLVGMRKTLVFYQGRAPKGRKSDWVMHEFRLE 143 9**************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MSSNSSLSMV ESKLPPGFRF HPRDEELICD YLMKKIDQSP DQQQQYPFLI EVDLNKSEPW 60 EIPEVACVGG KEWYFYSQRD RKYATGLRTN RATVSGYWKA TGKDRAVVRK GSLVGMRKTL 120 VFYQGRAPKG RKSDWVMHEF RLEGPLNNNI RPQISSPRED WVLCRVFHKN KELLAAKQGT 180 SSNNIYYDNG AISSSSLPQL MENPYITFDQ TQPNNNNINM NELYYEQVPC FSIFTPNQTT 240 FTSHSHHHHH HPATSTTTGA TPITTAYGGF PADIGNYLNA TATSSTCDNK VIKAVLSHLS 300 TKNIIMEGNN NNNNSNFNNS SAQNIMNIKG GNSPSFGEVS SETSFLSEVA YHPTMWNNY

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MSSNSSLSMV ESKLPPGFRF HPRDEELICD YLMKKIDQSP DQQQQYPFLI EVDLNKSEPW  60
EIPEVACVGG KEWYFYSQRD RKYATGLRTN RATVSGYWKA TGKDRAVVRK GSLVGMRKTL  120
VFYQGRAPKG RKSDWVMHEF RLEGPLNNNI RPQISSPRED WVLCRVFHKN KELLAAKQGT  180
SSNNIYYDNG AISSSSLPQL MENPYITFDQ TQPNNNNINM NELYYEQVPC FSIFTPNQTT  240
FTSHSHHHHH HPATSTTTGA TPITTAYGGF PADIGNYLNA TATSSTCDNK VIKAVLSHLS  300
TKNIIMEGNN NNNNSNFNNS SAQNIMNIKG GNSPSFGEVS SETSFLSEVA YHPTMWNNY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56010.2	8e-96	NAC family protein