PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU13346.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NF-YB

Protein Properties

Length: 177aa MW: 20294 Da PI: 6.6675

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU13346.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	169.2	5e-53	32	127	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 +eqdr+lPianv+rimkk+lP nakisk+aket+qecvsefisfvt+ea dkc++ekrkt+ngdd++wal++lGf+dyveplk yl+k+rele+e+ PHU13346.1 32 KEQDRLLPIANVGRIMKKILPPNAKISKEAKETMQECVSEFISFVTGEACDKCHNEKRKTLNGDDICWALGSLGFDDYVEPLKRYLHKHRELESER 127 89*******************************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 177 aa Download sequence
MVDNNNINIL RSKYHKESSN YTSISEDNGV IKEQDRLLPI ANVGRIMKKI LPPNAKISKE 60 AKETMQECVS EFISFVTGEA CDKCHNEKRK TLNGDDICWA LGSLGFDDYV EPLKRYLHKH 120 RELESERMDQ NKCVIGVLGN NNIDQDQKER DESSTMPFKI TIMDHKGGNN FLPKTPY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47810.1	1e-57	NF-YB family protein