PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU13478.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 259aa    MW: 29877.8 Da    PI: 9.5073
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU13478.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM38.43.9e-1281343128
         NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikev.diykv..ePwdLp.k....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                  GfrFhPtd e +  +L+k +++++++ + +i++  d+y++  ePw++  +         ++++y ++ ++k          + + g Wk + + k+v+
  PHU13478.1   8 SGFRFHPTDTEGL-TFLQKFMAKQEMNDSGFISTNiDVYDSeeEPWKIYsRgvpcG--VADDSLYRYFITKK----------SSNLGNWKLQDEGKPVH 93 
                 7**********99.99*********99988876555**988668****73344322..23444443332222..........235699**********9 PP

         NAM  94 sk...kgelvglkktLvfy...kgrapkgektdWvmheyrl 128
                 +    ++ ++ +kk + +     +++++     W+m+ey+l
  PHU13478.1  94 RDsssSTVVIVCKKKICYMinnIEEHREDDGHYWLMKEYEL 134
                 98655555699*******965523444555688******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MEQRGVRSGF RFHPTDTEGL TFLQKFMAKQ EMNDSGFIST NIDVYDSEEE PWKIYSRGVP  60
CGVADDSLYR YFITKKSSNL GNWKLQDEGK PVHRDSSSST VVIVCKKKIC YMINNIEEHR  120
EDDGHYWLMK EYELSNFILH QFDDDRRDYV LVLSRRSLLR IVFRRQKMFL RNLEQSKSIH  180
NNTSNPNRNL ILKIRPKRAL GEGVMVNLSP SRKVPSFLSL AHRGEGLNDD GKFAVRLCDG  240
GALRSGPNSH SSNSSEPPR