PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU13539.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 337aa    MW: 37229.5 Da    PI: 4.8149
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU13539.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.91.2e-102603001055
                 HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 r+RR+riN+++  L++l+P+      +K++ +++Le+Av+Y+k Lq
  PHU13539.1 260 RKRRERINERLRILQSLVPNG-----TKVDISTMLEEAVQYVKFLQ 300
                 9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MEPVVAMSEG EWSSLSGTCS TEEANFMAQL FGSCPNELPS SSNIGLPIFW TGHESNIGGT  60
SEISMYSSDD ANSSMYHFPS SSNFQPMLLR NNTSMTMEQS SLPPANNIIE ADAIEFLNKE  120
ASNDSMESGE NNMPESVLHG QGLQLGREYD QMQVPEQSEG SKKRSRSPVD HIPKNKRSVK  180
PKKNMKSVID DEIGMKENNN TNLLHRQSSF SCCSEDESNV SSYDLYGLAS SDNSKGVSAP  240
NGKSRANRGS ATDPQSLYAR KRRERINERL RILQSLVPNG TKVDISTMLE EAVQYVKFLQ  300
LQIKLLSSDD LWMYAPIAYN GMDIGLDLKI GIPNPKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.11e-52bHLH family protein