PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU13602.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 218aa    MW: 25155.6 Da    PI: 10.0338
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU13602.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding361.6e-114185347
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +WT+ E++l++ + +++  g+Wk+I+r+    +t+ q+ s+ qky
       PHU13602.1 41 PWTKNEHQLFLMGLNRFKRGDWKSISRYYVVSKTPTQVASHAQKY 85
                     8*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MENSPENNDV FIVSDDDGHD QQHHLVQQED NHRPCRRRGT PWTKNEHQLF LMGLNRFKRG  60
DWKSISRYYV VSKTPTQVAS HAQKYFSRQD SKTPVERRRP SINDIQTVSL NLKTTSITTM  120
GATYLINNNR FAYNNNHQAA SSSIHFHYPS YTFSGPTFSN NFNENFEISH LGETSGSNSS  180
VMGKNNNNNK FNNLNRPVSP RPFLSTYLSS IRRNDPQI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04760.14e-30MYB family protein