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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | PHU13631.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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| Family | B3 | ||||||||
| Protein Properties | Length: 312aa MW: 34948.3 Da PI: 10.0407 | ||||||||
| Description | B3 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | B3 | 53.4 | 4.8e-17 | 79 | 169 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
f+k +++s+v + +l lp +f+e+h +++++++l +e+g ++e + +k+ + l++GW+ F+ +++L++gD ++F+l++ ++f +v ++r+
PHU13631.1 79 FIKSMVRSHVYSCFWLGLPTRFCEDHLP--KSTVDVVLVNEEGLEYEALF--IGKRTG--LSGGWRAFALDHKLDDGDALIFELIEPTKF--KVYIVRA 169
89************************53..3789****************..555544..************************987777..8888876 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 312 aa Download sequence |
MSEPRRSSRA RNPVSSYRDE IDDIELPSLR KRSKFGSSWA SYLARPLEEV KVASFEERAQ 60 ALKSAEKLHS NLQSGNPYFI KSMVRSHVYS CFWLGLPTRF CEDHLPKSTV DVVLVNEEGL 120 EYEALFIGKR TGLSGGWRAF ALDHKLDDGD ALIFELIEPT KFKVYIVRAS HCSNEVDKSA 180 AEKEESEAEE ASTNVTKKRK KTSNKSKVST VAKEEVYIVR ASHHSSGVDK SGAEKEESEA 240 EEASTNATKK RKKTSNKSKI PTVAKEESEA EEASTNATKK RKKTSNKSKV PTVAKEKEPV 300 KASATRRSTR RK |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 197 | 201 | KKRKK |
| 2 | 249 | 253 | KKRKK |
| 3 | 249 | 283 | KKRKKTSNKSKIPTVAKEESEAEEASTNATKKRKK |
| 4 | 250 | 284 | KKRKKTSNKSKIPTVAKEESEAEEASTNATKKRKK |
| 5 | 279 | 283 | KKRKK |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT5G58280.1 | 1e-70 | B3 family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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