PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU13692.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 259aa    MW: 30352.2 Da    PI: 9.1671
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU13692.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.31.6e-141695999
                HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3  9 dvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                  +k+g l +p  f+ ++ +g   ++++ ++  + g++W vkl  ++++    +++GW++F+++++L+ g +++F+++g+++f  +v++f++
  PHU13692.1 16 PGFKNG-LKVPIGFL-KYlKGH--GHVEHVVLKRAGKKWLVKL--NGRR----FEDGWEKFAEEHDLQLGNMLIFRHEGDMDF--HVSIFDS 95
                556666.999****9.664544..778899999**********..8887....9*****************************..****997 PP
2B354.81.7e-17162250497
                 E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
          B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                  +++s++l+++ l++p++fa+ +g+ +++  t++++d + rsW++ l     ++ +++++GW++F+ an LkegD ++F+ +  +++++++k++
  PHU13692.1 162 CTMKSYNLAKSFLCVPRPFAQLNGLRNRRC-TIMIND-KQRSWTFSL--YSLGNVTYIGGGWRNFCVANCLKEGDRLMFEIVI-NGEKPMLKFR 250
                 5789****************9999987664.676555.99*******..8888889************************765.5666788776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MEIPPKKPHF FKPILPGFKN GLKVPIGFLK YLKGHGHVEH VVLKRAGKKW LVKLNGRRFE  60
DGWEKFAEEH DLQLGNMLIF RHEGDMDFHV SIFDSTNCDT EYAEYLQEKK IGNFFYDVSN  120
FLCISIMNVE HSNLQIDYLD TSKIYVSRQH HVHEAYHSQF VCTMKSYNLA KSFLCVPRPF  180
AQLNGLRNRR CTIMINDKQR SWTFSLYSLG NVTYIGGGWR NFCVANCLKE GDRLMFEIVI  240
NGEKPMLKFR GKFVFCLLY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.14e-36B3 family protein