PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU13703.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB

Protein Properties

Length: 189aa MW: 22259 Da PI: 9.0275

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU13703.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	42.1	2e-13	8	55	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W ++Ed++l+ +v+++G ++W+ a+ g++Rt+k+c++rw +yl PHU13703.1 8 KGPWAEQEDLQLAFYVNLFGDRRWDFLAKVSGLRRTGKSCRLRWVNYL 55 79********************************************97 PP
2	Myb_DNA-binding	55.3	1.5e-17	61	106	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T++E+ l+++++ ++G++ W++Ia +++ gRt++++k++w++++ PHU13703.1 61 RGKMTPQEERLILELHSKWGNR-WSKIAMKLP-GRTDNEIKNYWRTHM 106 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 189 aa Download sequence
MAQEEMRKGP WAEQEDLQLA FYVNLFGDRR WDFLAKVSGL RRTGKSCRLR WVNYLHPGLK 60 RGKMTPQEER LILELHSKWG NRWSKIAMKL PGRTDNEIKN YWRTHMRKKA QDERKNKAST 120 ISPSSSFSNS SSFYSNSPDV DFTPSTEDNE RNIYDTGGFQ KNVAENMKVY SMDEIWKDIE 180 LSEENETMC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G46130.1	2e-75	MYB family protein