PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU13875.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 1202aa MW: 134964 Da PI: 6.7229

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU13875.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	53.5	8e-17	101	155	52	107
NAM 52 kaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLv 107 + +++e +fF+++d+ky++g+r nrat++gyWk+tg+d+++++kkg+++g+kktL PHU13875.1 101 EYNDDE-WFFCPKDRKYQNGQRLNRATERGYWKTTGEDRNITNKKGAKIGMKKTLF 155 334445.59*********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 1202 aa Download sequence
MNGTGFISLI IWDIDATSLI GKSSTELKDG LLLDHEFNNQ GSAEEKEFKE AEQDTNMLTP 60 LKIYSKRSRS SSKKGKSVMV DEDVNFEQSS NKVHKDISVV EYNDDEWFFC PKDRKYQNGQ 120 RLNRATERGY WKTTGEDRNI TNKKGAKIGM KKTLFIPLIR SRITPNSKSR RSSDFTVFHC 180 PLSQKETDGQ EERNIQTLED MLRACAIDFN EIWDDNLPLI EFAYNNSYHS SIQMTSFEAL 240 YGRRCRSLIG WFRSSVPGLT MILRSCCSTS SIVKSERSDD AGPIEWEELG TAFFDRFFPQ 300 ELKEAKVLEF INLTQDFSIP IWKWEVVNMD FAMSLPRTSH QHDSVWAIVD RMTKSSHFLP 360 VHTSYLAEDY SKLYIKELVR LHGVSLSIIS GSEEIWKERK AQSRYVVTFK NLNRCGKNTL 420 SYKEIPIKIL DYQTRRLRNK EVSLVKVLWK NHSIEGATWK AEDDMHTKYP NLFFANSDQA 480 QGSNLRLTPL FRWHGGNLAI YIAATISPQP LAVGKPSQKS KEHTSNHIPQ VSYATSLNPK 540 PIESSFSKTN LKPIEVIHGL STLLSRLNER QELVKKQRLH QAAVVRLSSC VPDLPTLSTL 600 QPKVFGMKEQ KQLENFHNTN GNNEVVDDEH VKDGQKVKEI EAAAKVDSGI VIDDFGVSLI 660 AKHLNKGKDM TNDENWTMNK SSREQERQER RPSSNPNRLE IAIAPRPSPN TTFLANETRV 720 GLIRGGTDIS FNASGAFNTL TQKNRLEGAA SHPLFNCNDV VTTTHGFQQV MVKRSHDALG 780 ESSRPQTAGG GTTHKRPVGM TFSPLRQMIV SYPNPEFPIF DPAQLKVDLP MNSPQPCPLV 840 ASKKDGFYDS LQPQKGQPEV VVKDNGKEQE AQGVDELAVD AAKARPDIYG GATTHKRPCG 900 TTYRPFGRII CSYPNPEFPI FDPTQLTVNL PLDPPQPYPP TMSNKDASYN LQGEVVEDNA 960 EQLATQGVEA AATAAAKPRP DKQPCGTTCS PFGQMICSYP NPEFPVFDPM RLTVDLSMEP 1020 PQPYSPLVST RYGSENNLQP QKGMTEEVVE DNVKELATQG VEAAAAAAPA APAKPRRDKR 1080 PRGTTYNPFG GIIRSYPNPE FPIFDPKGLT VDLYIDPPKP YLPLVSKKDG SDDNLQPQKS 1140 QTRDVVEYNE KEQATQGGEA AAMADAEPRS GKCDEVVPVV RRYPMPDMNF PATEKDDEDE 1200 EN

Sequence ? help Back to Top

Protein Sequence Length: 1202 aa Download sequence

MNGTGFISLI IWDIDATSLI GKSSTELKDG LLLDHEFNNQ GSAEEKEFKE AEQDTNMLTP  60
LKIYSKRSRS SSKKGKSVMV DEDVNFEQSS NKVHKDISVV EYNDDEWFFC PKDRKYQNGQ  120
RLNRATERGY WKTTGEDRNI TNKKGAKIGM KKTLFIPLIR SRITPNSKSR RSSDFTVFHC  180
PLSQKETDGQ EERNIQTLED MLRACAIDFN EIWDDNLPLI EFAYNNSYHS SIQMTSFEAL  240
YGRRCRSLIG WFRSSVPGLT MILRSCCSTS SIVKSERSDD AGPIEWEELG TAFFDRFFPQ  300
ELKEAKVLEF INLTQDFSIP IWKWEVVNMD FAMSLPRTSH QHDSVWAIVD RMTKSSHFLP  360
VHTSYLAEDY SKLYIKELVR LHGVSLSIIS GSEEIWKERK AQSRYVVTFK NLNRCGKNTL  420
SYKEIPIKIL DYQTRRLRNK EVSLVKVLWK NHSIEGATWK AEDDMHTKYP NLFFANSDQA  480
QGSNLRLTPL FRWHGGNLAI YIAATISPQP LAVGKPSQKS KEHTSNHIPQ VSYATSLNPK  540
PIESSFSKTN LKPIEVIHGL STLLSRLNER QELVKKQRLH QAAVVRLSSC VPDLPTLSTL  600
QPKVFGMKEQ KQLENFHNTN GNNEVVDDEH VKDGQKVKEI EAAAKVDSGI VIDDFGVSLI  660
AKHLNKGKDM TNDENWTMNK SSREQERQER RPSSNPNRLE IAIAPRPSPN TTFLANETRV  720
GLIRGGTDIS FNASGAFNTL TQKNRLEGAA SHPLFNCNDV VTTTHGFQQV MVKRSHDALG  780
ESSRPQTAGG GTTHKRPVGM TFSPLRQMIV SYPNPEFPIF DPAQLKVDLP MNSPQPCPLV  840
ASKKDGFYDS LQPQKGQPEV VVKDNGKEQE AQGVDELAVD AAKARPDIYG GATTHKRPCG  900
TTYRPFGRII CSYPNPEFPI FDPTQLTVNL PLDPPQPYPP TMSNKDASYN LQGEVVEDNA  960
EQLATQGVEA AATAAAKPRP DKQPCGTTCS PFGQMICSYP NPEFPVFDPM RLTVDLSMEP  1020
PQPYSPLVST RYGSENNLQP QKGMTEEVVE DNVKELATQG VEAAAAAAPA APAKPRRDKR  1080
PRGTTYNPFG GIIRSYPNPE FPIFDPKGLT VDLYIDPPKP YLPLVSKKDG SDDNLQPQKS  1140
QTRDVVEYNE KEQATQGGEA AAMADAEPRS GKCDEVVPVV RRYPMPDMNF PATEKDDEDE  1200
EN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.2	2e-16	NAC family protein