PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU13904.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family CAMTA
Protein Properties Length: 170aa    MW: 20051.4 Da    PI: 10.0403
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU13904.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-158.31.5e-18671312386
        CG-1  23 kheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvgg..vevlycyYa 86 
                 +++   ++ +    g ++L+nrk++ryfrkDG++w+ +k gktv+E+ ekL +g    e ++c+ +
  PHU13904.1  67 SFKYRRASMNVVAGGFVFLFNRKVLRYFRKDGHNWR-RKAGKTVKEAQEKLEIGKrsSEFVMCLHV 131
                 4555567777788999*******************8.679*************9877455555444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MDLFMKHLYL PEDLQRDYYK QLAYLKIEIL RRLCDDVIEA EAIQSTLNKR IMAAKNTDFN  60
QNLKSCSFKY RRASMNVVAG GFVFLFNRKV LRYFRKDGHN WRRKAGKTVK EAQEKLEIGK  120
RSSEFVMCLH VVAVLNCRIR KYNEAIPYLE RSIEIPDLDM GQNLSLAKFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64220.21e-15CAMTA family protein