PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU14559.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family FAR1
Protein Properties Length: 200aa    MW: 22971.9 Da    PI: 9.209
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU14559.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR155.32.1e-1749134290
        FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                  Yn+Y    GF vrk  ++++  +ge+t+r f Cs eg++++ +   ++++r+r e r+gC a++k k + +g wev +++  H+H++ 
  PHU14559.1  49 AYNSYVVARGFGVRKGGKTNN-VKGETTRRLFLCSWEGQSNKLSPF-QERKRQRLEYRCGCMARIKFKIS-NGIWEVCEFNDVHSHPMI 134
                 5***************98877.8888**************999888.99999****************99.***************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MKDAHGDKGK DSSAQEDFSV NEPNICNTSK NFVFEIDMKI NSEEESYNAY NSYVVARGFG  60
VRKGGKTNNV KGETTRRLFL CSWEGQSNKL SPFQERKRQR LEYRCGCMAR IKFKISNGIW  120
EVCEFNDVHS HPMIEDNLKH FIHSGRRLTN ATKNILGSTI DVDIRTKKVV RYLQNEAGGV  180
KNVGFIEQDA QTLFKHIREI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.18e-14FAR1 family protein