PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU14662.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

C2H2

Protein Properties

Length: 312aa MW: 34801 Da PI: 8.1183

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU14662.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.9	0.00016	196	218	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C+k+ +++ L +H H PHU14662.1 196 YQCEICNKVLKSSQALGSHKTIH 218 9******************9887 PP
2	zf-C2H2	11.1	0.0012	243	265	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp Cgk F + L H r+H PHU14662.1 243 HECPFCGKIFGSGQALGGHKRSH 265 79**************9999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 312 aa Download sequence
MSMEKHKCKL CSRKFSSGKA MGGHMRSHLR ALPLPPKTPP QKQDSAAGGG GCSESTISLY 60 EDEEEEEEIR DDKCLSYVLR ENPKKSSRSV DPEFMDAGSV VHEKDQSETE STMKPTKRRS 120 KRTRLRRLFT SDHEAVDHHA KKEKKNPPEF ESVSSFSDTS PEEDIAVCLM MLSKDVWKKS 180 NSDESQLKDK KQGKYYQCEI CNKVLKSSQA LGSHKTIHKK NKSSSCNEEN SRQVRAKNVD 240 HDHECPFCGK IFGSGQALGG HKRSHILSSS ITGSSSSKVG ESLMDSSSGK FPYGFIDLNM 300 PAPVEDEDFS IS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02030.1	7e-30	C2H2 family protein