PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU14734.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 401aa MW: 45225.3 Da PI: 6.1085

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU14734.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172.9	9.8e-54	65	192	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 lppGfrFhPtdeelv +yLk+k+++ ++el evi+ +d+yk++PwdLp k + +++ ewyfF++rdkky++g+r+nratksgyWkatgkd++v++ k PHU14734.1 65 LPPGFRFHPTDEELVGYYLKRKTDELEIEL-EVIPVIDLYKFDPWDLPeKsFLPKRDMEWYFFCSRDKKYPNGSRTNRATKSGYWKATGKDRKVVC-KP 161 79**************************.99**********95344555788**********************************.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 ++vg +ktLvfy+grap g +tdWvmheyrl PHU14734.1 162 AVVGYRKTLVFYRGRAPLGDRTDWVMHEYRL 192 99*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MDGGSTIHSP CRLHSFDWWD KNNNSELSGH RKRCFLATFQ VLWKSENNEL QLAVGTFTLM 60 AGISLPPGFR FHPTDEELVG YYLKRKTDEL EIELEVIPVI DLYKFDPWDL PEKSFLPKRD 120 MEWYFFCSRD KKYPNGSRTN RATKSGYWKA TGKDRKVVCK PAVVGYRKTL VFYRGRAPLG 180 DRTDWVMHEY RLCDDASQGT PSFQGPFALC RVTKRKNISS KMSDVHGATT FKQVECSSSN 240 DAFTSAVASN EPLVLSDDIP TQTTYMSSDS NYSTPVNSPY QTTQIGNYDS AMRTNAADIW 300 MSQNMILDPS KECLQGRSIS GNYSHVFSNS TSCLPSDQYD FTSSSSFPNF GGEVVLSGDL 360 NGYGCVSPFS VHESYMKFYG NEDISDNGYN QNDSLGNANP F

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MDGGSTIHSP CRLHSFDWWD KNNNSELSGH RKRCFLATFQ VLWKSENNEL QLAVGTFTLM  60
AGISLPPGFR FHPTDEELVG YYLKRKTDEL EIELEVIPVI DLYKFDPWDL PEKSFLPKRD  120
MEWYFFCSRD KKYPNGSRTN RATKSGYWKA TGKDRKVVCK PAVVGYRKTL VFYRGRAPLG  180
DRTDWVMHEY RLCDDASQGT PSFQGPFALC RVTKRKNISS KMSDVHGATT FKQVECSSSN  240
DAFTSAVASN EPLVLSDDIP TQTTYMSSDS NYSTPVNSPY QTTQIGNYDS AMRTNAADIW  300
MSQNMILDPS KECLQGRSIS GNYSHVFSNS TSCLPSDQYD FTSSSSFPNF GGEVVLSGDL  360
NGYGCVSPFS VHESYMKFYG NEDISDNGYN QNDSLGNANP F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17980.1	6e-78	NAC family protein