PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU14791.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family M-type_MADS
Protein Properties Length: 167aa    MW: 19079.6 Da    PI: 6.6856
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU14791.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF40.24.4e-13250149
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                k+ie k  r  +fskRr+g+ KKA+EL    d+++ +i+fs+ gk + +
  PHU14791.1  2 KKIEKKEDRFASFSKRRAGLYKKASELVAEFDVDIGIIMFSPGGKPHSF 50
                689*****************************************98776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MKKIEKKEDR FASFSKRRAG LYKKASELVA EFDVDIGIIM FSPGGKPHSF FHPTVDAIVS  60
RFQNPDVQLS ESTHLVAAYA RKTVNQLESR LEEFDIREKA AITLTNQLDQ MAKSRQKGWW  120
ESIEQLNADE VAKFEAWLNA TTFNMHHRLN QLENEATISL GCESFGV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04100.19e-22M-type_MADS family protein