PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU14876.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

C2H2

Protein Properties

Length: 436aa MW: 48443.5 Da PI: 7.8817

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU14876.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	20.5	1.2e-06	193	214	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C+ Cgk F+r nL+ H+r H PHU14876.1 193 FCTVCGKGFKRDANLRMHMRGH 214 6*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MEQQVNQRSE NHDSTTTQEW DPRAILKNVS FLEQKIHQLR ELVRIIVDHK SLAGIQGNDL 60 SFQQQQLIIA DLTSIIAQLI STAGSFLPTV KHHSLSSANP TTKQIGQFGG ILVPSETGTS 120 AGALSQSANV TKAEDQPNHV DVTGDCGIEQ NYVADEHEAK DEGEPHAEVN LHPGSYEILQ 180 LEKEEILAPH THFCTVCGKG FKRDANLRMH MRGHGDEYKT PAALAKPHKE PTSGTKLIKG 240 YSCPCVGCKR NKEHKKFQPL KTILCVKKHY RRTHCEKSYA CSRCNVKKFS VIADLRTHEK 300 HCGKDKWHCS CGTTFSRKDK LFGHISLFQG HTPAIPQDET KGFAGISDHS QTGDATKEAG 360 KIGFEINLQN SSGLQNTMNE KGSADSRGSF SSPWNFESSK LSDLREFPQP PFEDPENSFS 420 FLMAGSCHYP RIARKI

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MEQQVNQRSE NHDSTTTQEW DPRAILKNVS FLEQKIHQLR ELVRIIVDHK SLAGIQGNDL  60
SFQQQQLIIA DLTSIIAQLI STAGSFLPTV KHHSLSSANP TTKQIGQFGG ILVPSETGTS  120
AGALSQSANV TKAEDQPNHV DVTGDCGIEQ NYVADEHEAK DEGEPHAEVN LHPGSYEILQ  180
LEKEEILAPH THFCTVCGKG FKRDANLRMH MRGHGDEYKT PAALAKPHKE PTSGTKLIKG  240
YSCPCVGCKR NKEHKKFQPL KTILCVKKHY RRTHCEKSYA CSRCNVKKFS VIADLRTHEK  300
HCGKDKWHCS CGTTFSRKDK LFGHISLFQG HTPAIPQDET KGFAGISDHS QTGDATKEAG  360
KIGFEINLQN SSGLQNTMNE KGSADSRGSF SSPWNFESSK LSDLREFPQP PFEDPENSFS  420
FLMAGSCHYP RIARKI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.2	1e-159	C2H2 family protein