PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU14882.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 322aa MW: 37593.7 Da PI: 6.2351

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU14882.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	174.3	3.6e-54	8	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPt+eelv +yLk+k+++ k++l +vi+++d+y++ePwd++ ++e++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk+vls k PHU14882.1 8 VPPGFRFHPTEEELVGYYLKRKINSLKIDL-DVITDIDLYRIEPWDIQDrckLGYEEQNEWYFFSHKDRKYPTGTRTNRATAAGFWKATGRDKAVLS-K 104 69**************************.9***********952432234677**********************************.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +g++ktLvfykgrap+g+ktdW+mheyrl PHU14882.1 105 EKMIGMRKTLVFYKGRAPNGRKTDWIMHEYRL 136 999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
MDQMDSCVPP GFRFHPTEEE LVGYYLKRKI NSLKIDLDVI TDIDLYRIEP WDIQDRCKLG 60 YEEQNEWYFF SHKDRKYPTG TRTNRATAAG FWKATGRDKA VLSKEKMIGM RKTLVFYKGR 120 APNGRKTDWI MHEYRLQSTE LAPPQEEGWV VCRAFKKPSP NKQPSLEAWQ NAYYFRGGNY 180 TTYRPTSSSL SEITSTPPMH HQPLNNTNAF NQPTNFHQFT FNPSHDHQNM IINNSSHNFF 240 ENQLVELPQL DSPTTISTTF CTKDTSFGEQ SYTDNNNEDD RDEEKHSNGI NNSQFYGDWK 300 NFDTLVEPPS HISHLLECFP DL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G71930.1	1e-100	NAC family protein